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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80130511_80131339_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80130511 - 80131339

Intron Length:

829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TCTGACAGAAAA

Flanking Amino Acid:

VCQLSIGIMQVFIDCLELLS

Intron Amino Acid Position:

612

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

74.1

38.3

Major BPS

0.65

1.5

85.7

34.9

Major PPT

79.5

0.66

0.8

72.8

37.5

Minor 5ss

39.1

-1.2

2.9

49.8

46.4

Minor BPS

42.8

-0.5

55.71

42.5

Associated Gene:

Gene:

EXOC2

Ensembl Gene ID:

ENSAPLG00000013910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014529

80024763 - 80174569

149807