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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80170058_80171863_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80170058 - 80171863

Intron Length:

1806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATGAG

U12 Branch Point Sequence:

TTTTCCTTACAG

Flanking Amino Acid:

TVAIYLTPESNSSFKQALEA

Intron Amino Acid Position:

821

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

81.6

33.2

Major BPS

51.9

0.05

1.6

51.5

43.9

Major PPT

0.83

0.8

80.7

31.5

Minor 5ss

43.6

-0.7

2.9

58.5

40.3

Minor BPS

68.9

0.46

1.8

76.73

40.6

Associated Gene:

Gene:

EXOC2

Ensembl Gene ID:

ENSAPLG00000013910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014529

80024763 - 80174569

149807