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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80202812_80204605_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80202812 - 80204605

Intron Length:

1794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTTCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

GTCTGATTAACA

Flanking Amino Acid:

QRQRKLITAHVEPMFARQLY

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

74.7

41.5

Major BPS

0.52

1.1

77.7

35.3

Major PPT

68.6

0.42

1.1

71.5

38.6

Minor 5ss

37.6

-1.4

2.8

47.1

41.6

Minor BPS

55.5

0.17

2.1

69.26

42.8

Associated Gene:

Gene:

IRF4

Ensembl Gene ID:

ENSAPLG00000014646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028998

80202668 - 80213358

10691

ENSAPLT00000022132

80202668 - 80213267

10600