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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80265765_80267610_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
80265765 - 80267610

Intron Length:
1846

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTACGAAGA

5'SS Class:
major

3'SS Sequence:
TTCTTTCTCACAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTTGAT

U12 Branch Point Sequence:
CTATATTTGATA

Flanking Amino Acid:
MILPGLFIGNF

Intron Amino Acid Position:
2

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.8
0.56
1
64.6
41.3

Major BPS
87.6
0.93
0.8
77.4
37.3

Major PPT
87.6
0.85
0.6
83.5
25

Minor 5ss
31.9
-2.1
3.1
37.5
41.8

Minor BPS
55.4
0.16
1.5
63.29
37.3

Associated Gene:

Gene:
DUSP22

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

80234171 - 80267724
33554