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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80265765_80311925_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
80265765 - 80311925

Intron Length:
46161

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGAGTGA

5'SS Class:
major

3'SS Sequence:
TTCTTTCTCACAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTTGAT

U12 Branch Point Sequence:
CTATATTTGATA

Flanking Amino Acid:
FSASSCRSSQILPGLFIGNF

Intron Amino Acid Position:
34

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.9
0.47
1.1
59.9
41.6

Major BPS
87.6
0.93
0.8
77.4
37.3

Major PPT
87.6
0.85
0.6
83.5
25

Minor 5ss
34.1
-1.8
3.6
46.6
48.7

Minor BPS
55.4
0.16
1.5
63.29
37.3

Associated Gene:

Gene:
DUSP22

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

80234313 - 80312024
77712