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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80321870_80375174_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

80321870 - 80375174

Intron Length:

53305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCTTC

5'SS Class:

weak_major

3'SS Sequence:

CATGACGCTGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCATGAC

U12 Branch Point Sequence:

TGTCCGACACCT

Flanking Amino Acid:

PNCYDSGLLKVFMMRSGYSS

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

74.9

36.3

Major BPS

47.8

-0.1

1.3

39.4

40.4

Major PPT

52.1

0.05

1.1

49.3

Minor 5ss

65.8

0.53

2.2

40.1

Minor BPS

39.4

-0.7

2.5

63.75

45.7

Associated Gene:

Gene:

NQO2

Ensembl Gene ID:

ENSAPLG00000015289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028542

80315978 - 80377267

61290