Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_80323662_80324831_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80323662 - 80324831

Intron Length:

1170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCAT

5'SS Class:

major

3'SS Sequence:

GCTTTGGATCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

TTGCTTTGGATC

Flanking Amino Acid:

DTRYLLWPMQHGIMHFCGVK

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

63.1

42.9

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

63.4

0.3

54.6

Minor 5ss

30.7

-2.2

3.6

46.8

48.5

Minor BPS

48.6

-0.1

1.4

58.54

34.7

Associated Gene:

Gene:

NQO2

Ensembl Gene ID:

ENSAPLG00000015289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015938

80308529 - 80325005

16477