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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80336400_80338727_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80336400 - 80338727

Intron Length:

2328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCATTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

CTGGCTCTGACA

Flanking Amino Acid:

ILVDADFHIKIADLGVACFK

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.9

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

86.4

0.82

0.7

84.1

30.4

Minor 5ss

42.4

-0.8

3.1

57.3

47.4

Minor BPS

48.1

-0.1

1.8

58.23

Associated Gene:

Gene:

RIPK1

Ensembl Gene ID:

ENSAPLG00000015420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016085

80331299 - 80351948

20650

ENSAPLT00000025938

80334151 - 80350170

16020