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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80338957_80340100_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80338957 - 80340100

Intron Length:

1144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTTAC

5'SS Class:

major

3'SS Sequence:

GTTAATTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

GAAATGTTAATT

Flanking Amino Acid:

AIFANKEPYEHGINEAQICF

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.3

69.3

38.5

Major BPS

84.4

0.85

34.5

Major PPT

80.9

0.7

0.9

77.2

41.4

Minor 5ss

41.4

-1

2.8

48.1

41.4

Minor BPS

48.1

-0

63.24

40.9

Associated Gene:

Gene:

RIPK1

Ensembl Gene ID:

ENSAPLG00000015420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025938

80334151 - 80350170

16020

ENSAPLT00000016085

80331299 - 80351948

20650