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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80340251_80341415_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80340251 - 80341415

Intron Length:

1165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTCTTTTTACAG

Flanking Amino Acid:

QEAEKRPTFAEISKTYKPFY

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

80.7

33.7

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

91.6

0.93

0.6

86.9

23.9

Minor 5ss

33.6

-1.9

3.2

47.4

Minor BPS

-0.1

1.8

59.29

43.1

Associated Gene:

Gene:

RIPK1

Ensembl Gene ID:

ENSAPLG00000015420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025938

80334151 - 80350170

16020

ENSAPLT00000016085

80331299 - 80351948

20650