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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80344511_80346340_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80344511 - 80346340

Intron Length:

1830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

AAATATTTAATT

Flanking Amino Acid:

VAEDPSNGQIDQPNSLHSSQ

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

90.7

1.01

0.7

19.9

Major PPT

83.4

0.75

0.7

80.6

24.7

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

63.4

0.5

1.4

73.62

36.9

Associated Gene:

Gene:

RIPK1

Ensembl Gene ID:

ENSAPLG00000015420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025938

80334151 - 80350170

16020

ENSAPLT00000016085

80331299 - 80351948

20650