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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80360162_80361765_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80360162 - 80361765

Intron Length:

1604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCTGGAGA

5'SS Class:

major

3'SS Sequence:

TATGGTTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GTTACTTTAATT

Flanking Amino Acid:

HAVLLLPGMLGSGQTDFGPQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.3

62.3

43.8

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

78.9

0.65

69.5

45.7

Minor 5ss

33.1

-1.9

2.9

40.4

45.3

Minor BPS

0.89

1.2

85.44

34.7

Associated Gene:

Gene:

BPHL

Ensembl Gene ID:

ENSAPLG00000015545

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016204

80357578 - 80373853

16276