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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80361933_80366014_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

80361933 - 80366014

Intron Length:

4082

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTACAAATCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTCATATAACT

Flanking Amino Acid:

DAKDAVDLMQALKFKKFSLL

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

78.6

35.9

Major BPS

100

1.24

0.5

100

Major PPT

54.7

0.11

1.1

50.9

41.2

Minor 5ss

38.1

-1.3

3.1

52.9

44.3

Minor BPS

60.5

0.41

1.8

83.76

36.4

Associated Gene:

Gene:

BPHL

Ensembl Gene ID:

ENSAPLG00000015545

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016204

80357578 - 80373853

16276