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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80576863_80582338_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80576863 - 80582338

Intron Length:

5476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

GGTTTCTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

AATGACTTAATG

Flanking Amino Acid:

KHLDVDSAEHLFESVSDFTS

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

70.9

39.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

72.5

0.51

0.8

70.3

36.4

Minor 5ss

38.9

-1.3

3.4

55.1

43.4

Minor BPS

0.08

1.7

60.04

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013773

80576745 - 80588844

12100