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Intron Name: Anas_platyrhynchos_platyrhynchos_2_8069070_8069535_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
8069070 - 8069535

Intron Length:
466

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCA|GTAAGTTAT

5'SS Class:
major

3'SS Sequence:
TTTTGTTTATTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGATAAT

U12 Branch Point Sequence:
TTTTGTTTATTA

Flanking Amino Acid:
TQFLVYNGVYQYTSPDFLYI

Intron Amino Acid Position:
215

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.6
0.67
1
78.1
32.4

Major BPS
72.6
0.56
1.2
72.3
40.4

Major PPT
81.3
0.71
0.9
82.3
34.1

Minor 5ss
44.1
-0.6
2.9
63.8
41.6

Minor BPS
57.8
0.24
2
74.5
38.1

Associated Gene:

Gene:
INSIG1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8066130 - 8071527
5398