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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80700104_80702960_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80700104 - 80702960

Intron Length:

2857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTACTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

CTCTCTTTACTT

Flanking Amino Acid:

ESERRRLSSPRTRTRDDILS

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

1.1

38.1

Major BPS

81.9

0.79

0.9

80.1

Major PPT

83.7

0.76

0.7

82.1

28.6

Minor 5ss

45.1

-0.5

2.6

45.4

Minor BPS

62.1

0.46

1.6

74.65

43.4

Associated Gene:

Gene:

PRPF4B

Ensembl Gene ID:

ENSAPLG00000009869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039221

80697498 - 80717860

20363

ENSAPLT00000010316

80696001 - 80717860

21860