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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80703135_80703389_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80703135 - 80703389

Intron Length:

255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGATA

5'SS Class:

strong_major

3'SS Sequence:

TTACTGTTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

TTACTGTTACTA

Flanking Amino Acid:

PRRRSRSPRRRDRGRRSRSR

Intron Amino Acid Position:

470

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

81.1

32.6

Major BPS

61.3

0.28

30.6

Major PPT

69.1

0.43

63.1

42.8

Minor 5ss

35.2

-1.7

3.3

48.1

47.6

Minor BPS

45.9

-0.3

2.2

60.77

39.8

Associated Gene:

Gene:

PRPF4B

Ensembl Gene ID:

ENSAPLG00000009869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039221

80697498 - 80717860

20363

ENSAPLT00000010316

80696001 - 80717860

21860