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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80704263_80705003_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80704263 - 80705003

Intron Length:

741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

AGATTAATAATT

Flanking Amino Acid:

RRLQREAIVQKYKGQGQPED

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

77.9

36.9

Major BPS

0.75

78.6

Major PPT

77.3

0.61

0.9

76.9

37.3

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

48.3

-0

1.8

66.24

37.9

Associated Gene:

Gene:

PRPF4B

Ensembl Gene ID:

ENSAPLG00000009869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039221

80697498 - 80717860

20363

ENSAPLT00000010316

80696001 - 80717860

21860