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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80707098_80708553_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80707098 - 80708553

Intron Length:

1456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAGGTAAT

5'SS Class:

major

3'SS Sequence:

CTTTCTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

GAGCTGTTAATT

Flanking Amino Acid:

SDDMFAAYFDSARLRAAGFG

Intron Amino Acid Position:

647

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

1.1

34.8

Major BPS

84.4

0.85

34.5

Major PPT

86.2

0.81

0.8

84.1

30.8

Minor 5ss

38.4

-1.3

3.2

54.9

42.7

Minor BPS

48.2

-0

62.78

41.6

Associated Gene:

Gene:

PRPF4B

Ensembl Gene ID:

ENSAPLG00000009869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010316

80696001 - 80717860

21860

ENSAPLT00000039221

80697498 - 80717860

20363