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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80709467_80710613_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80709467 - 80710613

Intron Length:

1147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CGTTTTCTAATT

Flanking Amino Acid:

AVKIIRNNELMQKTGLKELE

Intron Amino Acid Position:

726

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

89.1

24.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

39.8

-1.1

2.9

41.5

Minor BPS

56.4

0.28

1.7

72.39

39.2

Associated Gene:

Gene:

PRPF4B

Ensembl Gene ID:

ENSAPLG00000009869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039221

80697498 - 80717860

20363

ENSAPLT00000010316

80696001 - 80717860

21860