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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80715803_80717494_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80715803 - 80717494

Intron Length:

1692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTACAA

U12 Branch Point Sequence:

TTTTCTACAAGG

Flanking Amino Acid:

YIEVDKVTEREKVTVMSTIN

Intron Amino Acid Position:

942

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

75.3

40.8

Major BPS

0.27

1.1

69.2

36.3

Major PPT

81.9

0.72

0.8

77.2

37.1

Minor 5ss

36.4

-1.5

2.9

43.6

43.3

Minor BPS

48.4

-0.2

2.1

64.42

43.5

Associated Gene:

Gene:

PRPF4B

Ensembl Gene ID:

ENSAPLG00000009869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039221

80697498 - 80717860

20363

ENSAPLT00000010316

80696001 - 80717860

21860