About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_80747976_80756937_R

Intron Information:

Intron Rank:
1
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
80747976 - 80756937
Intron Length:
8962

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GCG|GTGAGGCCT
5'SS Class:
major
3'SS Sequence:
ATCACTGTTGTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TCTTTAT
U12 Branch Point Sequence:
CTCTCTTTATCA
Flanking Amino Acid:
PAGLRALAGSGRHEVQSWTR
Intron Amino Acid Position:
92

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
75.5
0.6
1
63.4
42.4
Major BPS
83.9
0.84
1
73.9
41.3
Major PPT
68.2
0.41
0.9
61.9
39.2
Minor 5ss
28.4
-2.5
3.3
40.8
45
Minor BPS
63.9
0.43
1.6
70.42
42.6

Associated Gene:

Gene:
OTULINL
Ensembl Gene ID:
ENSAPLG00000009753
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000032041
80741088 - 80757211
16124