Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_80747976_80759170_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80747976 - 80759170

Intron Length:

11195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

ATCACTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CTCTCTTTATCA

Flanking Amino Acid:

SRINHSKRTVGRHEVQSWTR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

29.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

68.2

0.41

0.9

61.9

39.2

Minor 5ss

40.6

-1

2.7

47.5

42.3

Minor BPS

63.9

0.43

1.6

70.42

42.6

Associated Gene:

Gene:

OTULINL

Ensembl Gene ID:

ENSAPLG00000009753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010172

80739485 - 80759267

19783