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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80798996_80802915_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80798996 - 80802915

Intron Length:

3920

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTCATTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

CTTCCTTTATGT

Flanking Amino Acid:

LLQPDSQDDKTSSRLLVRPT

Intron Amino Acid Position:

1811

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.7

40.1

Major BPS

0.65

1.1

77.4

37.3

Major PPT

69.9

0.45

64.3

41.2

Minor 5ss

31.4

-2.1

3.1

40.2

45.5

Minor BPS

52.5

0.16

1.9

72.72

44.5

Associated Gene:

Gene:

TRIO

Ensembl Gene ID:

ENSAPLG00000008508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008982

80786655 - 80940826

154172