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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80850655_80852705_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80850655 - 80852705

Intron Length:

2051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATTC

5'SS Class:

strong_major

3'SS Sequence:

CTTGGGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCATGGTGAACT

Flanking Amino Acid:

NDAMHLSMLEGFDENIESQG

Intron Amino Acid Position:

1413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

75.9

34.8

Major BPS

100

1.24

0.5

100

Major PPT

72.8

0.51

0.9

69.2

41.8

Minor 5ss

41.1

-1

3.4

58.5

46.3

Minor BPS

46.3

-0.2

2.5

69.42

Associated Gene:

Gene:

TRIO

Ensembl Gene ID:

ENSAPLG00000008508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036922

80787795 - 80950381

162587

ENSAPLT00000008982

80786655 - 80940826

154172