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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80852818_80854852_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80852818 - 80854852

Intron Length:

2035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATAGAT

U12 Branch Point Sequence:

TGTGTAGAAACA

Flanking Amino Acid:

RITKYQLLLKELLTCCEEGK

Intron Amino Acid Position:

1376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

1.2

84.4

33.5

Major BPS

53.6

0.09

1.3

52.7

43.2

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

33.8

-1.8

2.6

44.2

Minor BPS

40.4

-0.7

2.4

56.25

43.1

Associated Gene:

Gene:

TRIO

Ensembl Gene ID:

ENSAPLG00000008508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036922

80787795 - 80950381

162587

ENSAPLT00000008982

80786655 - 80940826

154172