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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80876265_80881942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80876265 - 80881942

Intron Length:

5678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

TTTTTTGTTACA

Flanking Amino Acid:

LRHLQAEVKQVLGWIRNGES

Intron Amino Acid Position:

857

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

84.8

32.8

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

0.94

0.7

87.5

Minor 5ss

38.3

-1.3

3.3

57.7

46.5

Minor BPS

0.02

2.3

74.12

37.8

Associated Gene:

Gene:

TRIO

Ensembl Gene ID:

ENSAPLG00000008508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036922

80787795 - 80950381

162587

ENSAPLT00000008982

80786655 - 80940826

154172