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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80900326_80906211_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80900326 - 80906211

Intron Length:

5886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAAT

5'SS Class:

strong_major

3'SS Sequence:

TATTTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TTTGACTTAATC

Flanking Amino Acid:

RHEDFEEVAQNTYTNADKLL

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

83.1

28.4

Major BPS

78.2

0.7

77.9

32.1

Major PPT

89.9

0.9

0.7

29.3

Minor 5ss

34.5

-1.8

3.1

48.5

47.2

Minor BPS

70.3

0.62

1.6

79.2

36.3

Associated Gene:

Gene:

TRIO

Ensembl Gene ID:

ENSAPLG00000008508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036922

80787795 - 80950381

162587

ENSAPLT00000008982

80786655 - 80940826

154172