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Intron Name: Anas_platyrhynchos_platyrhynchos_2_80914653_80918492_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

80914653 - 80918492

Intron Length:

3840

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGCGTC

5'SS Class:

strong_major

3'SS Sequence:

TCCCGGTGGTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

AGACAAGTAATT

Flanking Amino Acid:

YEHITLAYSEVSQDGKSLLD

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.9

87.7

28.5

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

57.8

0.18

1.1

56.4

43.4

Minor 5ss

30.6

-2.2

4.3

49.2

47.3

Minor BPS

40.6

-0.6

2.2

56.25

39.3

Associated Gene:

Gene:

TRIO

Ensembl Gene ID:

ENSAPLG00000008508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008982

80786655 - 80940826

154172

ENSAPLT00000036922

80787795 - 80950381

162587