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Intron Name: Anas_platyrhynchos_platyrhynchos_2_81184154_81184841_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
81184154 - 81184841

Intron Length:
688

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAT|GTCTGTAGA

5'SS Class:
major

3'SS Sequence:
TGTTACATGATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTTAC

U12 Branch Point Sequence:
TGTTTGTTACAT

Flanking Amino Acid:
VDAKKYSKYTCEIQYGGRVT

Intron Amino Acid Position:
255

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
61.3
0.27
1.4
63.6
42.3

Major BPS
71.4
0.53
1.2
63.4
44

Major PPT
63.7
0.31
1.1
59
41.6

Minor 5ss
39
-1.2
2.6
46.9
41.8

Minor BPS
47.9
-0
2.3
73.29
43.5

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

81178698 - 81195718
17021