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Intron Name: Anas_platyrhynchos_platyrhynchos_2_81253371_81255219_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

81253371 - 81255219

Intron Length:

1849

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCCCACAAC

5'SS Class:

weak_major

3'SS Sequence:

TTCTCTTATTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

ATTCTCTTATTT

Flanking Amino Acid:

YFFSYRIQKESIARTQVLTK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.3

51.1

42.4

Major BPS

73.5

0.58

79.3

29.4

Major PPT

81.4

0.71

0.8

81.5

29.4

Minor 5ss

24.8

-2.9

3.9

33.7

35.9

Minor BPS

63.7

0.51

1.5

79.4

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039492

81253334 - 81258994

5661