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Intron Name: Anas_platyrhynchos_platyrhynchos_2_82007974_82114073_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

82007974 - 82114073

Intron Length:

106100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CCATAAATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTCCATAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

31.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

67.2

0.39

59.1

40.3

Minor 5ss

35.8

-1.6

3.3

46.4

48.9

Minor BPS

75.8

0.89

1.7

94.83

31.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036711

82007603 - 82354937

347335