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Intron Name: Anas_platyrhynchos_platyrhynchos_2_82114208_82240517_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82114208 - 82240517

Intron Length:

126310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTTCATTTATTT

Flanking Amino Acid:

SAILASVKEQELQFERLTRE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

70.6

41.3

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

91.8

0.94

0.7

84.8

35.4

Minor 5ss

44.8

-0.6

2.6

56.4

Minor BPS

56.8

0.29

1.7

78.23

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043113

82114079 - 82354937

240859

ENSAPLT00000036711

82007603 - 82354937

347335

ENSAPLT00000025214

82049887 - 82354937

305051