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Intron Name: Anas_platyrhynchos_platyrhynchos_2_82366344_82379976_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82366344 - 82379976

Intron Length:

13633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCAGT

5'SS Class:

strong_major

3'SS Sequence:

ATGTCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TGTCTCTTAAAT

Flanking Amino Acid:

LHCWLPLQLSAGSRASYSSQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

74.4

41.9

Major BPS

77.8

0.69

78.2

31.8

Major PPT

80.1

0.68

0.9

73.9

36.1

Minor 5ss

47.2

-0.3

2.6

66.5

44.6

Minor BPS

71.4

0.75

1.4

83.62

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016359

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017073

82366304 - 82633795

267492