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Intron Name: Anas_platyrhynchos_platyrhynchos_2_82380172_82397939_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82380172 - 82397939

Intron Length:

17768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTGTCGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

AATTTTTTACTT

Flanking Amino Acid:

AHTGTYRTSTAPSSPGVDSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.6

32.8

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

76.8

0.6

0.8

72.9

31.8

Minor 5ss

30.6

-2.2

3.4

39.4

46.5

Minor BPS

60.6

0.41

1.5

74.5

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016359

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017073

82366304 - 82633795

267492