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Intron Name: Anas_platyrhynchos_platyrhynchos_2_82705754_82706527_F

Intron Information:

Intron Rank:

147508

Intron Class:

major

Intron Phase:

Intron Coordinates:

82705754 - 82706527

Intron Length:

774

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TGTTTTTTTAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

74.3

37.2

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

81.4

0.71

86.9

31.1

Minor 5ss

36.9

-1.5

2.6

45.1

42.8

Minor BPS

50.4

-0.1

1.8

60.53

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043053

82704535 - 82706793

2259