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Intron Name: Anas_platyrhynchos_platyrhynchos_2_82791037_82801385_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
82791037 - 82801385

Intron Length:
10349

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGTTC

5'SS Class:
strong_major

3'SS Sequence:
TCTTTTCCTTGAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATTAAT

U12 Branch Point Sequence:
GTTTCATTAATT

Flanking Amino Acid:
NTALITAAQAGANVHSTDPS

Intron Amino Acid Position:
188

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.4
0.98
0.8
83
30.4

Major BPS
79.4
0.73
0.9
79.6
29.1

Major PPT
68.3
0.41
1.7
81.3
30.8

Minor 5ss
41.3
-1
3.3
58.3
46.6

Minor BPS
76.8
0.92
1.5
90.31
33.1

Associated Gene:

Gene:
ANKRD33B

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

82790186 - 82828134
37949