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Intron Name: Anas_platyrhynchos_platyrhynchos_2_82801516_82827702_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
82801516 - 82827702

Intron Length:
26187

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTGAGCAGC

5'SS Class:
major

3'SS Sequence:
GCTTTGCTTACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTTAT

U12 Branch Point Sequence:
TCTCTCTTTATG

Flanking Amino Acid:
EVRETDRNRRNGLIVACYQG

Intron Amino Acid Position:
145

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.1
0.59
1
63.1
43.4

Major BPS
83.9
0.84
1
73.9
41.3

Major PPT
79.5
0.66
0.9
72.2
38

Minor 5ss
33.8
-1.8
2.8
34.8
41.4

Minor BPS
54.1
-0
1.7
60.04
42.1

Associated Gene:

Gene:
ANKRD33B

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

82790186 - 82828134
37949

82790186 - 82828134
37949