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Intron Name: Anas_platyrhynchos_platyrhynchos_2_82859765_82859855_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

82859765 - 82859855

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGCA

5'SS Class:

major

3'SS Sequence:

GTGCGGCCGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

GGGCGCTGACCT

Flanking Amino Acid:

AGSAVWLGDQVERVLCPYDS

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

68.6

36.2

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

53.8

0.09

1.1

46.8

41.5

Minor 5ss

29.6

-2.3

3.4

39.3

Minor BPS

42.3

-0.5

2.1

45.5

Associated Gene:

Gene:

SNRNP48

Ensembl Gene ID:

ENSAPLG00000016279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016986

82859012 - 82865909

6898