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Intron Name: Anas_platyrhynchos_platyrhynchos_2_82860220_82861034_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82860220 - 82861034

Intron Length:

815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCGGG

5'SS Class:

major

3'SS Sequence:

TCTCTATCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

TCTTCTCTATCT

Flanking Amino Acid:

ENLKVPSVAMDKDLQFRIVQ

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

47.1

Major BPS

0.62

65.3

41.5

Major PPT

0.74

0.8

77.4

30.1

Minor 5ss

35.3

-1.7

3.3

38.2

46.7

Minor BPS

58.4

0.34

1.9

80.25

Associated Gene:

Gene:

SNRNP48

Ensembl Gene ID:

ENSAPLG00000016279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016986

82859012 - 82865909

6898