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Intron Name: Anas_platyrhynchos_platyrhynchos_2_82866409_82867287_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82866409 - 82867287

Intron Length:

879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TATTCCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTTTTATTC

Flanking Amino Acid:

QEFLSGIKEQADQQDGMVQL

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

1.3

81.8

38.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.8

0.81

0.8

77.5

36.4

Minor 5ss

42.6

-0.8

2.9

41.5

Minor BPS

61.4

0.34

1.5

70.06

35.9

Associated Gene:

Gene:

ROPN1L

Ensembl Gene ID:

ENSAPLG00000016260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016968

82866297 - 82873696

7400

ENSAPLT00000033299

82866283 - 82873107

6825