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Intron Name: Anas_platyrhynchos_platyrhynchos_2_82867464_82869777_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82867464 - 82869777

Intron Length:

2314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTCG

5'SS Class:

strong_major

3'SS Sequence:

GCCTCCCCTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

CGTATCTTGACT

Flanking Amino Acid:

LALGCSVLGESLLSSMKHAC

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

74.1

37.2

Major BPS

0.72

38.9

Major PPT

72.9

0.52

0.8

64.9

30.9

Minor 5ss

46.6

-0.3

2.4

45.7

Minor BPS

66.2

0.59

1.3

76.21

40.4

Associated Gene:

Gene:

ROPN1L

Ensembl Gene ID:

ENSAPLG00000016260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033299

82866283 - 82873107

6825

ENSAPLT00000016968

82866297 - 82873696

7400