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Intron Name: Anas_platyrhynchos_platyrhynchos_2_82870240_82872649_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82870240 - 82872649

Intron Length:

2410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

CCCATTCATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TATGCATTAAAA

Flanking Amino Acid:

QPHDLLQWSAAYFTALSKGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.3

72.7

44.5

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

66.9

0.38

0.9

61.8

33.7

Minor 5ss

40.3

-1.1

2.8

41.7

Minor BPS

0.28

1.8

71.45

39.9

Associated Gene:

Gene:

ROPN1L

Ensembl Gene ID:

ENSAPLG00000016260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033299

82866283 - 82873107

6825

ENSAPLT00000016968

82866297 - 82873696

7400