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Intron Name: Anas_platyrhynchos_platyrhynchos_2_82965292_82966307_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

82965292 - 82966307

Intron Length:

1016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CATTTCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CACACCTTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.13

0.6

93.1

14.6

Major BPS

100

1.24

0.5

100

Major PPT

80.9

0.69

0.8

72.9

Minor 5ss

41.9

-0.9

2.9

57.8

46.8

Minor BPS

61.4

0.22

1.5

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013115

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013659

82965191 - 82970066

4876