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Intron Name: Anas_platyrhynchos_platyrhynchos_2_83011820_83012830_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83011820 - 83012830

Intron Length:

1011

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTAATTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGTGTTCTAATT

Flanking Amino Acid:

TIFIRGGNKMIIEEAKRSLH

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

66.6

39.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

76.8

0.6

0.9

67.1

42.8

Minor 5ss

37.2

-1.4

3.3

46.9

Minor BPS

52.8

0.17

1.7

72.39

39.2

Associated Gene:

Gene:

CCT5

Ensembl Gene ID:

ENSAPLG00000012960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039146

82947683 - 83017489

69807

ENSAPLT00000013511

83010156 - 83017489

7334