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Intron Name: Anas_platyrhynchos_platyrhynchos_2_83016225_83016721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83016225 - 83016721

Intron Length:

497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

CGTTATTTAAAA

Flanking Amino Acid:

EIGDGTTGVVVLAGALLEQA

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

81.6

0.78

0.8

24.9

Major PPT

92.5

0.96

0.7

87.5

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

57.9

0.25

1.6

66.33

39.8

Associated Gene:

Gene:

CCT5

Ensembl Gene ID:

ENSAPLG00000012960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039146

82947683 - 83017489

69807

ENSAPLT00000013511

83010156 - 83017489

7334