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Intron Name: Anas_platyrhynchos_platyrhynchos_2_83017032_83017384_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83017032 - 83017384

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CATTCTTTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

ACTGATTTAACT

Flanking Amino Acid:

TRLMGLEALKSHIMAAKAVA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

81.4

0.71

0.8

76.3

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

61.5

0.44

1.6

74.83

42.2

Associated Gene:

Gene:

CCT5

Ensembl Gene ID:

ENSAPLG00000012960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039146

82947683 - 83017489

69807

ENSAPLT00000013511

83010156 - 83017489

7334