Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_83119653_83120040_F

Intron Information:

Intron Rank:

150773

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

83119653 - 83120040

Intron Length:

388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

GACATGTGATCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TTAACAGTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.8

90.9

28.7

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

0.09

1.1

50.9

46.6

Minor 5ss

45.3

-0.5

2.9

45.2

Minor BPS

47.1

-0.1

2.3

72.62

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026885

83111705 - 83120477

8773

ENSAPLT00000022407

83111705 - 83120477

8773