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Intron Name: Anas_platyrhynchos_platyrhynchos_2_83302318_83322546_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

83302318 - 83322546

Intron Length:

20229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TCGAATTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

TTTCTTCGAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

77.9

38.6

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

74.7

0.56

65.2

45.1

Minor 5ss

33.7

-1.9

41.1

45.5

Minor BPS

49.9

0.07

1.7

74.57

36.2

Associated Gene:

Gene:

SEMA5A

Ensembl Gene ID:

ENSAPLG00000006152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028203

83225112 - 83548305

323194

ENSAPLT00000023474

83302222 - 83549838

247617

ENSAPLT00000006403

83302222 - 83570415

268194