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Intron Name: Anas_platyrhynchos_platyrhynchos_2_83358743_83401603_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83358743 - 83401603

Intron Length:

42861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTGGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTCTAATGAATT

Flanking Amino Acid:

LRLEDLSLIQAVEWQCDEAT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

85.8

25.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

74.9

0.56

67.9

42.5

Minor 5ss

49.9

-0

2.4

66.7

44.7

Minor BPS

52.1

0.14

1.9

75.25

41.3

Associated Gene:

Gene:

SEMA5A

Ensembl Gene ID:

ENSAPLG00000006152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006403

83302222 - 83570415

268194

ENSAPLT00000028203

83225112 - 83548305

323194

ENSAPLT00000023474

83302222 - 83549838

247617